STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J0XKN0Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
A0A0J0XLI0
Trm112p-domain-containing protein.
    
 0.968
A0A0J0XH72
RF_PROK_I domain-containing protein.
  
 
 0.858
A0A0J0XNW3
Release factor.
  
 
 0.858
A0A0J0XLU1
Translation release factor.
    
 0.787
A0A0J0XSP2
Coproporphyrinogen III oxidase.
   
 
 0.708
A0A0J0XGB6
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.698
A0A0J0XP96
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
    
 0.669
A0A0J0XVU7
Tr-type G domain-containing protein.
    
 0.660
A0A0J0XCT1
F1 complex, OSCP/delta subunit of ATPase.
  
   0.651
A0A0J0XQF8
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.632
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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