STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J0XKP1PHD-type domain-containing protein. (781 aa)    
Predicted Functional Partners:
A0A0J0XPE0
B30.2/SPRY domain-containing protein.
   
 
 0.922
A0A0J0XTD6
WD40 repeat-like protein.
    
 
 0.921
A0A0J0XX93
WD40 repeat-like protein.
    
 
 0.908
A0A0J0XLT6
Uncharacterized protein.
   
 
 0.762
A0A0J0XYI8
SET domain-containing protein.
   
 
 0.762
A0A0J0XL38
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.726
A0A0J0XCP8
Chromatin remodeling-related protein.
    
 
 0.705
A0A0J0XYI9
Ubiquitin/40s ribosomal protein S27a fusion.
    
 
 0.687
A0A0J0XC70
RRN7-type domain-containing protein.
    
   0.672
A0A0J0XDG4
Actin/actin-like protein; Belongs to the actin family.
    
 
 0.656
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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