STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J0XP09WD_REPEATS_REGION domain-containing protein. (1438 aa)    
Predicted Functional Partners:
A0A0J1AW99
Vesicle budding-related protein; Belongs to the WD repeat SEC13 family.
    
 0.999
A0A0J0XK22
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.995
A0A0J0XNB0
Putative ER to Golgi transport-related protein.
   
 0.994
A0A0J1B7D4
Putative SAR small monomeric GTPase; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.989
A0A0J0XCL8
Beta-sandwich domain of Sec23/24.
   
 0.962
A0A0J0XF01
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.933
A0A0J0XPH3
EF-hand.
    
 
 0.915
A0A0J0XCR8
Snare-like protein; Belongs to the synaptobrevin family.
    
 0.861
A0A0J0XQN7
Trafficking protein particle complex subunit BET3.
     
 0.827
A0A0J0XK60
DDHD domain-containing protein.
    
 0.823
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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