STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J0XQH4Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
A0A0J0XJR4
Serine/threonine-protein phosphatase.
   
 0.791
A0A0J1BBV8
Serine/threonine-protein phosphatase.
   
 0.791
A0A0J0XEJ7
DUF625-domain-containing protein.
   
 
 0.704
A0A0J0XSK5
Serine/threonine-protein phosphatase.
    
 0.688
A0A0J1B8D6
Serine/threonine-protein phosphatase.
    
 0.681
A0A0J0XFL9
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.666
A0A0J0XKT2
Serine/threonine-protein phosphatase.
    
 0.666
A0A0J1B0C7
Metallo-dependent phosphatase.
    
 0.666
A0A0J0XTF5
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 
 0.557
A0A0J0XVI1
Replication protein A, subunit RPA32.
    
 0.542
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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