STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J0XRW25-methylaminomethyl-2-thiouridylate-methyltransferase. (455 aa)    
Predicted Functional Partners:
A0A0J0XCZ2
ER to Golgi transport-related protein.
  
 0.808
A0A0J0XE82
Uncharacterized protein.
  
 0.808
A0A0J0XWG1
ER to Golgi transport-related protein.
  
 0.808
A0A0J0XX49
Riboflavin kinase.
  
 
  0.742
A0A0J0XH89
Putative argininosuccinate lyase.
    
  0.718
A0A0J0XYG4
Cysteine desulfurase.
  
 
 0.699
A0A0J1B8R2
Uncharacterized protein.
  
  
 0.686
A0A0J0XXM8
PLP-dependent transferase.
  
 
 0.675
A0A0J0XL57
Pkinase-domain-containing protein.
   
  0.670
A0A0J1BBS8
Uncharacterized protein.
  
  
 0.663
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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