STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J0XTV7Uncharacterized protein. (276 aa)    
Predicted Functional Partners:
A0A0J0XPN8
Putative rRNA pseudouridine synthase.
   
   0.702
A0A0J0XK77
Uncharacterized protein.
   
   0.681
A0A0J0XGV6
Protein MAK16; Belongs to the MAK16 family.
   
  
 0.673
A0A0J0XUW0
Rsa3 domain-containing protein.
   
 
 0.627
A0A0J0XTU8
Fcf2-domain-containing protein.
   
  
 0.587
A0A0J0XLP1
Ebp2-domain-containing protein.
   
    0.583
A0A0J0XJ58
Pseudouridine synthase.
   
   0.557
A0A0J0XK87
Uncharacterized protein.
   
  
 0.555
A0A0J0XXN4
CBF-domain-containing protein.
   
   0.553
A0A0J0XBP5
Uncharacterized protein.
   
   0.552
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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