STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J0XU33Putative pre-mRNA splicing factor. (606 aa)    
Predicted Functional Partners:
A0A0J0XCS5
Slu7 domain-containing protein.
   
 0.999
A0A0J0XKD9
MIF4G-domain-containing protein.
   
 0.999
A0A0J0XQ76
Putative RNA helicase.
   
 0.999
A0A0J0XQV6
mRNA splicing factor SYF2.
    
 0.999
A0A0J1BAH8
mRNA splicing factor.
    
  0.999
A0A0J0XEZ0
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.998
A0A0J0XII0
Cir_N domain-containing protein.
    
 0.996
A0A0J0XLX7
DUF572-domain-containing protein.
    
 0.996
A0A0J0XCX1
Cwf21-domain-containing protein.
    
 0.995
A0A0J0XND1
Uncharacterized protein.
   
 0.994
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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