STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J1B4H2Threonyl-tRNA synthetase. (847 aa)    
Predicted Functional Partners:
A0A0J0XY62
Initiation factor 2.
 
 0.845
A0A0J1B3R6
Ribosomal protein L15.
   
 
 0.820
A0A0J0XUC5
S15/NS1 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.793
A0A0J0XD90
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.784
A0A0J1B6B6
Ribosomal large subunit assembly and maintenance-related protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.784
A0A0J0XZ25
60s ribosomal protein l19, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.770
A0A0J0XDE7
Mitochondrial 37S ribosomal protein MRP2.
   
 
 0.769
A0A0J0XL34
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.767
A0A0J0XJ82
Uncharacterized protein.
  
   0.755
A0A0J0XUK1
Putative structural constituent of ribosome; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.737
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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