STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J1B8V9CID domain-containing protein. (613 aa)    
Predicted Functional Partners:
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 0.999
A0A0J0XIC5
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.991
A0A0J0XRS6
RNA-binding domain-containing protein.
    
 0.990
A0A0J0XWC6
Cleavage and polyadenylation specific protein.
    
 0.990
A0A0J1AU36
Uncharacterized protein.
    
 0.990
A0A0J0XLI5
Metallo-hydrolase/oxidoreductase.
    
 0.989
A0A0J1AZS8
Ssu72-like protein.
   
 
 0.974
A0A0J0XN00
Suf-domain-containing protein.
    
 0.967
A0A0J0XUM5
Suf domain-containing protein.
    
 0.967
A0A0J0XH80
Fip1 domain-containing protein.
    
 0.965
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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