STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J1B8W9Putative mRNA export factor elf1. (1100 aa)    
Predicted Functional Partners:
A0A0J0XCT4
Putative WD-repeat protein.
   
   0.999
A0A0J1B225
WD40 repeat-like protein.
   
   0.999
A0A0J0XFY1
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.998
A0A0J0XFP0
Elongation factor 3.
  
 
0.997
A0A0J0XPE8
Putative elongation factor 1-gamma (Ef-1-gamma).
   
 
 0.996
A0A0J1B1M0
Uncharacterized protein.
   
 
 0.996
A0A0J1BAA6
Putative 60s ribosomal protein l7.
   
 
 0.996
A0A0J1BAF6
Putative 60s ribosomal protein l27.
   
 
 0.995
A0A0J0XMM6
S4 RNA-binding domain-containing protein.
   
 
 0.994
A0A0J0XWQ6
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.994
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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