STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J1BA94Putative ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (152 aa)    
Predicted Functional Partners:
A0A0J0XBQ8
Putative 60s ribosomal protein L4-B.
  
 0.999
A0A0J0XBW5
Putative 60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.999
A0A0J0XBY1
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 
 0.999
A0A0J0XC70
RRN7-type domain-containing protein.
   
 0.999
A0A0J0XEA8
40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
A0A0J0XEJ5
Ribosomal protein L2.
  
 
 0.999
A0A0J0XEL1
Putative ribosomal protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
A0A0J0XEL7
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.999
A0A0J0XFP7
Uncharacterized protein.
   
 0.999
A0A0J0XFW1
Nucleic acid-binding protein; Belongs to the eIF-1A family.
  
 0.999
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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