STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J1BBU130s ribosomal protein s13; Belongs to the universal ribosomal protein uS13 family. (180 aa)    
Predicted Functional Partners:
A0A0J0XK54
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.995
A0A0J0XYU8
Putative 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.995
A0A0J1B8S2
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.995
A0A0J0XEA8
40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family.
  
 0.994
A0A0J0XFW1
Nucleic acid-binding protein; Belongs to the eIF-1A family.
  
 0.994
A0A0J0XGY3
S10_plectin domain-containing protein.
   
 0.994
A0A0J0XLH9
Putative ribosomal protein S20.
  
 0.994
A0A0J0XML3
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.994
A0A0J0XMN7
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.994
A0A0J0XTD4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.994
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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