STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J1BD59Calpain-like protease palB/RIM13; Belongs to the peptidase C2 family. (822 aa)    
Predicted Functional Partners:
A0A0J0XPH3
EF-hand.
   
 0.963
A0A0J0XJL6
Uncharacterized protein.
   
 0.819
A0A0J0XFL9
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.744
A0A0J1B0C7
Metallo-dependent phosphatase.
    
  0.714
A0A0J0XBY4
SH3 domain-containing protein.
    
   0.704
A0A0J0XBT0
Snf7-domain-containing protein.
    
 
 0.696
A0A0J0XDM4
Guanylate kinase.
    
 
 0.657
A0A0J1AT92
Uncharacterized protein.
    
 
 0.646
A0A0J0XWZ0
GRIP domain-containing protein.
    
 
 0.643
CC85DRAFT_2058
BRO1-domain-containing protein.
    
 
 0.636
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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