STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0J1BEI7NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (314 aa)    
Predicted Functional Partners:
A0A0J1BEN8
FSH1-domain-containing protein.
   
 
 0.655
A0A0J0XLK4
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.610
A0A0J0XKW1
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.594
A0A0J0XM86
Oxidoreductase.
  
 
  0.564
A0A0J0XZ04
Short chain dehydrogenase.
  
 
  0.543
A0A0J0XIU3
Cytochrome oxidase assembly.
   
 0.529
A0A0J0XPD0
ClpP/crotonase.
   
 0.527
A0A0J1BCG9
NAD(P)-binding protein.
  
 
  0.522
A0A0J0XYI9
Ubiquitin/40s ribosomal protein S27a fusion.
    
  0.521
A0A0J0XC80
Pex2_Pex12 domain-containing protein.
    
  0.517
Your Current Organism:
Cutaneotrichosporon oleaginosum
NCBI taxonomy Id: 879819
Other names: ATCC 20509, C. oleaginosum, Cutaneotrichosporon oleaginosum (J.J. Zhou, S.O. Suh & Gujjari) Xin Zhan Liu, F.Y. Bai, M. Groenew. & Boekhout, 2015, Trichosporon oleaginosum, Trichosporon oleaginosum J.J. Zhou, S.O. Suh & Gujjari, 2011, Trichosporon oleaginosus, Trichosporon sp. ATCC 20508, Trichosporon sp. ATCC 20509
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