STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM04873.1Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c. (235 aa)    
Predicted Functional Partners:
AFM03109.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.997
AFM04874.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2.
 
 
 0.984
AFM04871.1
PFAM: Polysulphide reductase, NrfD.
 
 
 
 0.980
AFM04872.1
Quinol:cytochrome c oxidoreductase membrane protein; PFAM: Protein of unknown function (DUF3341).
 
 
   0.980
AFM04870.1
Fe-S-cluster-containing hydrogenase subunit.
 
 
 0.952
AFM04869.1
Cytochrome c, mono- and diheme variants family; PFAM: Class III cytochrome C family; Cytochrome c.
 
 
   0.936
AFM04875.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.771
AFM04876.1
Heme/copper-type cytochrome/quinol oxidase, subunit 1; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.754
AFM04363.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
 
 
   0.670
AFM05593.1
Hypothetical protein.
   
 
 0.617
Your Current Organism:
Bernardetia litoralis
NCBI taxonomy Id: 880071
Other names: B. litoralis DSM 6794, Bernardetia litoralis DSM 6794, Flexibacter litoralis ATCC 23117, Flexibacter litoralis DSM 6794, Flexibacter litoralis IFO 15988
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