STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM05102.1Membrane-bound metallopeptidase; PFAM: Peptidase family M23. (397 aa)    
Predicted Functional Partners:
AFM04668.1
Cell division protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.894
AFM05101.1
Putative membrane protein; PFAM: Domain of unknown function (DUF368).
       0.614
AFM06214.1
Putative ATPase involved in cell division; PFAM: ABC transporter.
 
   
 0.608
AFM04803.1
PFAM: N-acetylmuramoyl-L-alanine amidase.
 
  
 0.585
AFM03194.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
  
   
 0.582
AFM03598.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23; LysM domain.
 
   
 0.539
AFM04421.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
  
   
 0.494
AFM04678.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23; manually curated.
  
   
 0.471
mltG
Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
     0.441
AFM03641.1
PFAM: Tetratricopeptide repeat.
 
 
   0.407
Your Current Organism:
Bernardetia litoralis
NCBI taxonomy Id: 880071
Other names: B. litoralis DSM 6794, Bernardetia litoralis DSM 6794, Flexibacter litoralis ATCC 23117, Flexibacter litoralis DSM 6794, Flexibacter litoralis IFO 15988
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.