Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFM02989.1 | AFM05253.1 | Fleli_0514 | Fleli_2903 | Hypothetical protein. | Hypothetical protein. | 0.564 |
AFM03780.1 | AFM03781.1 | Fleli_1348 | Fleli_1349 | Leucine Rich Repeat (LRR)-containing protein. | Leucine-rich repeat (LRR) protein; PFAM: Leucine Rich Repeat. | 0.660 |
AFM03780.1 | AFM05253.1 | Fleli_1348 | Fleli_2903 | Leucine Rich Repeat (LRR)-containing protein. | Hypothetical protein. | 0.438 |
AFM03781.1 | AFM03780.1 | Fleli_1349 | Fleli_1348 | Leucine-rich repeat (LRR) protein; PFAM: Leucine Rich Repeat. | Leucine Rich Repeat (LRR)-containing protein. | 0.660 |
AFM03781.1 | AFM05253.1 | Fleli_1349 | Fleli_2903 | Leucine-rich repeat (LRR) protein; PFAM: Leucine Rich Repeat. | Hypothetical protein. | 0.552 |
AFM04866.1 | AFM05253.1 | Fleli_2501 | Fleli_2903 | Leucine Rich Repeat (LRR)-containing protein; TIGRFAM: gliding motility-associated C-terminal domain. | Hypothetical protein. | 0.455 |
AFM05252.1 | AFM05253.1 | Fleli_2902 | Fleli_2903 | Acetyltransferase, ribosomal protein N-acetylase. | Hypothetical protein. | 0.409 |
AFM05253.1 | AFM02989.1 | Fleli_2903 | Fleli_0514 | Hypothetical protein. | Hypothetical protein. | 0.564 |
AFM05253.1 | AFM03780.1 | Fleli_2903 | Fleli_1348 | Hypothetical protein. | Leucine Rich Repeat (LRR)-containing protein. | 0.438 |
AFM05253.1 | AFM03781.1 | Fleli_2903 | Fleli_1349 | Hypothetical protein. | Leucine-rich repeat (LRR) protein; PFAM: Leucine Rich Repeat. | 0.552 |
AFM05253.1 | AFM04866.1 | Fleli_2903 | Fleli_2501 | Hypothetical protein. | Leucine Rich Repeat (LRR)-containing protein; TIGRFAM: gliding motility-associated C-terminal domain. | 0.455 |
AFM05253.1 | AFM05252.1 | Fleli_2903 | Fleli_2902 | Hypothetical protein. | Acetyltransferase, ribosomal protein N-acetylase. | 0.409 |