STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07937.1Protein of unknown function DUF81; COGs: COG0730 permease; InterPro IPR002781; KEGG: dat:HRM2_34990 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; IMG reference gene:2504153556; PFAM: Sulfite exporter TauE/SafE. (265 aa)    
Predicted Functional Partners:
AEB07938.1
KEGG: mta:Moth_2215 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504153557.
       0.414
AEB07939.1
Protein of unknown function DUF62; COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: dal:Dalk_3152 protein of unknown function DUF62; PFAM: Protein of unknown function DUF62; SPTR: Putative uncharacterized protein; IMG reference gene:2504153558; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase.
       0.414
AEB07940.1
Glycoside hydrolase 15-related protein; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: tro:trd_1824 glycosyl hydrolase, family 15; PFAM: Glycoside hydrolase 15-related; SPTR: Similar to glucan 1,4-alpha-glucosidase (Glucoamylase); IMG reference gene:2504153559; PFAM: Glycosyl hydrolases family 15.
       0.414
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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