STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB07965.1KEGG: dbr:Deba_1545 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504153585. (169 aa)    
Predicted Functional Partners:
AEB08956.1
KEGG: dde:Dde_1191 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504154628.
 
  
  0.916
AEB08961.1
Nickel transport complex protein, NikM subunit, transmembrane; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: dol:Dole_2023 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative uncharacterized protein; IMG reference gene:2504154633; PFAM: Nickel uptake substrate-specific transmembrane region.
 
  
  0.916
AEB10621.1
KEGG: dbr:Deba_1545 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156383.
  
  
 
0.904
AEB07966.1
COGs: COG2875 Precorrin-4 methylase; InterPro IPR000878; KEGG: dae:Dtox_0475 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Methyltransferase; IMG reference gene:2504153586; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases.
       0.762
AEB09955.1
Nickel transport complex protein, NikM subunit, transmembrane; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: oan:Oant_4175 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative ABC-type Co2+ transport system, periplasmic component; IMG reference gene:2504155680; PFAM: Nickel uptake substrate-specific transmembrane region.
 
     0.754
AEB09595.1
Nickel transport complex protein, NikM subunit, transmembrane; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: dbr:Deba_1637 nickel transport complex, NikM subunit, transmembrane; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative uncharacterized protein; IMG reference gene:2504155304; PFAM: Nickel uptake substrate-specific transmembrane region.
 
     0.753
AEB09957.1
Nickel transport complex protein, NikM subunit, transmembrane; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: oan:Oant_4175 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative ABC-type Co2+ transport system, periplasmic component; IMG reference gene:2504155682; PFAM: Nickel uptake substrate-specific transmembrane region.
 
     0.745
AEB08535.1
Nickel transport complex protein, NikM subunit, transmembrane; COGs: COG5266 ABC-type Co2+ transport system periplasmic component; InterPro IPR019613; KEGG: oan:Oant_4175 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative ABC-type Co2+ transport system, periplasmic component; IMG reference gene:2504154182; PFAM: Nickel uptake substrate-specific transmembrane region.
 
     0.741
AEB07963.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: tye:THEYE_A1083 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent receptor; IMG reference gene:2504153583; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
     0.709
AEB07964.1
Nickel transport complex protein, NikM subunit, transmembrane; InterPro IPR019613; KEGG: mpt:Mpe_A2803 putative ABC-type Co2+ transport system, periplasmic component; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative uncharacterized protein; IMG reference gene:2504153584; PFAM: Nickel uptake substrate-specific transmembrane region.
       0.628
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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