STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08247.1Nitrogenase MoFe cofactor biosynthesis protein NifE; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR005973:IPR000510; KEGG: sfu:Sfum_1013 nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: Nitrogenase MoFe cofactor biosynthesis protein NifE; IMG reference gene:2504153876; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family. (449 aa)    
Predicted Functional Partners:
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.972
AEB08248.1
Nitrogenase; COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR000510; KEGG: sfu:Sfum_1012 nitrogenase; PFAM: Nitrogenase/oxidoreductase, component 1; PRIAM: Nitrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2504153877; PFAM: Nitrogenase component 1 type Oxidoreductase; Belongs to the NifD/NifK/NifE/NifN family.
    
0.962
AEB08245.1
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
  
0.942
AEB08249.1
Nitrogenase cofactor biosynthesis protein NifB; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638:IPR005980:IPR007197:IPR003731; KEGG: sfu:Sfum_1011 nitrogenase cofactor biosynthesis protein NifB; PFAM: Radical SAM; Dinitrogenase iron-molybdenum cofactor biosynthesis; SMART: Elongator protein 3/MiaB/NifB; SPTR: Nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: Nitrogenase cofactor biosynthesis protein NifB; IMG reference gene:2504153878; PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.
 
  
 0.938
AEB08464.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: sta:STHERM_c03460 FeMo cofactor biosynthesis protein NifB; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: FeMo cofactor biosynthesis protein NifB; IMG reference gene:2504154104; PFAM: Radical SAM superfamily; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB.
 
  
 0.907
AEB08244.1
COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains; InterPro IPR005972:IPR010143:IPR000510; KEGG: sfu:Sfum_1016 nitrogenase molybdenum-iron protein alpha chain; PFAM: Nitrogenase/oxidoreductase, component 1; SPTR: Nitrogenase protein alpha chain; TIGRFAM: Nitrogenase molybdenum-iron protein alpha chain; Nitrogenase component 1, alpha chain; IMG reference gene:2504153873; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain.
 
  
0.809
AEB08242.1
COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: sfu:Sfum_1018 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; SPTR: Nitrogen fixation nifHD1 region glnB-like protein 1; IMG reference gene:2504153871; PFAM: Nitrogen regulatory protein P-II.
 
 
 0.780
AEB08246.1
KEGG: dvl:Dvul_3095 ferredoxin, 2fe-2s; SPTR: Ferredoxin, 2fe-2s; IMG reference gene:2504153875.
 
     0.740
AEB07905.1
Ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: sfu:Sfum_0727 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter; IMG reference gene:2504153524; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.
   
  
 0.645
AEB08243.1
COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: sfu:Sfum_1017 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; IMG reference gene:2504153872; PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 
 0.591
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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