STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08377.1COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pca:Pcar_3111 trehalose phosphorylase/synthase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1; IMG reference gene:2504154016; PFAM: Glycosyl transferases group 1. (407 aa)    
Predicted Functional Partners:
AEB08376.1
KEGG: sfu:Sfum_2347 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504154015.
     0.970
AEB08109.1
Malto-oligosyltrehalose trehalohydrolase; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR012768:IPR006589:IPR004193:IPR006047; KEGG: mta:Moth_1809 malto-oligosyltrehalose trehalohydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; PRIAM: 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Malto-oligosyltrehalose trehalohydrolase; TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; IMG reference gene:2504153736; PFAM: Alpha amylase, cat [...]
 
 0.966
AEB09978.1
Transcriptional regulator, XRE family; COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR001387; KEGG: pfu:PF1356 glucose-1-phosphate uridylyltransferase; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Glucose-1-phosphate uridylyltransferase; IMG reference gene:2504155703; PFAM: Nucleotidyl transferase; Helix-turn-helix.
    
 0.909
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.906
AEB09903.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nhl:Nhal_1697 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; IMG reference gene:2504155627; PFAM: Glycosyl transferases group 1.
  
  
 
0.906
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
     
 0.903
glgA-2
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
     
 0.903
AEB08081.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: fre:Franean1_3677 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Cellulose synthase (UDP-forming); IMG reference gene:2504153705; PFAM: Glycosyl transferase family 2; Cellulose synthase.
    
 0.901
AEB08131.1
UDP-glucuronate 5'-epimerase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: gme:Gmet_2330 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate 5'-epimerase; SPTR: NAD-dependent epimerase/dehydratase; IMG reference gene:2504153759; PFAM: NAD dependent epimerase/dehydratase family.
  
 
  0.821
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.592
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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