STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08469.1MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: hoh:Hoch_4648 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; IMG reference gene:2504154110; PFAM: MotA/TolQ/ExbB proton channel family. (224 aa)    
Predicted Functional Partners:
AEB08468.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: bba:Bd0478 TonB system transport protein ExbD2; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; IMG reference gene:2504154109; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.965
AEB09962.1
Protein TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR014168:IPR003400; KEGG: sfu:Sfum_0753 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; TIGRFAM: Biopolymer transport, TolR; IMG reference gene:2504155687; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein.
 
 
 0.921
AEB08467.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.917
AEB09102.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: bba:Bd0478 TonB system transport protein ExbD2; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; IMG reference gene:2504154779; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.908
AEB09959.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: pmy:Pmen_3869 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; IMG reference gene:2504155684; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.887
AEB08239.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: bba:Bd0478 TonB system transport protein ExbD2; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; IMG reference gene:2504153868; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.839
AEB08240.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.658
AEB09926.1
Sulfate-transporting ATPase; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sat:SYN_00946 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; IMG reference gene:2504155651; PFAM: ABC transporter.
 
   
 0.656
AEB09101.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.650
AEB09950.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.647
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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