STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08470.1Iron-chelate-transporting ATPase; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: sfu:Sfum_2739 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2504154111; PFAM: ABC transporter. (288 aa)    
Predicted Functional Partners:
AEB08471.1
ABC-type transporter, integral membrane subunit; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: sfu:Sfum_2740 transport system permease protein; PFAM: ABC transporter permease protein; SPTR: Transport system permease protein; IMG reference gene:2504154112; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
AEB10328.1
ABC-type transporter, integral membrane subunit; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ppd:Ppro_2080 transport system permease protein; PFAM: ABC transporter permease protein; SPTR: Transport system permease protein; IMG reference gene:2504156067; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.992
AEB08472.1
COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: dol:Dole_2060 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504154113; PFAM: Periplasmic binding protein.
 
 
 0.991
AEB10329.1
COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: sfu:Sfum_0493 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein; IMG reference gene:2504156068; PFAM: Periplasmic binding protein.
 
 
 0.961
AEB08474.1
Protein of unknown function DUF105; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491:IPR002808; KEGG: sfu:Sfum_2743 hypothetical protein; PFAM: Adenosylcobinamide amidohydrolase, CbiZ; Periplasmic binding protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504154115; PFAM: Periplasmic binding protein; Adenosylcobinamide amidohydrolase.
 
 
 0.924
AEB08958.1
Fe(3+)-transporting ATPase; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dsa:Desal_3208 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2504154630; PFAM: ABC transporter.
    
0.902
AEB08330.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003593:IPR010066:IPR003439:IPR013563; KEGG: bbe:BBR47_15580 ABC transporter ATP binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide transport ATP-binding protein AppD; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; IMG reference gene:2504153968; PFAM: ABC transporter; O [...]
 
     
0.900
AEB08011.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR010066:IPR003593:IPR000515:IPR003439:IPR 013563; KEGG: dal:Dalk_0870 binding-protein-dependent transport systems inner membrane component; PFAM: ABC transporter-like; Binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; TIGRFAM: Oligopeptide/dipeptide ABC t [...]
 
   
0.804
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.800
AEB08923.1
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.609
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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