Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEB08823.1 | AEB08825.1 | Desac_0953 | Desac_0955 | COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: aar:Acear_0784 formylmethanofuran dehydrogenase subunit E region; PFAM: Formylmethanofuran dehydrogenase, subunit E domain; SPTR: Formylmethanofuran dehydrogenase subunit E region; IMG reference gene:2504154486; PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon. | Hypothetical protein; IMG reference gene:2504154488. | 0.416 |
AEB08823.1 | tatC | Desac_0953 | Desac_0954 | COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: aar:Acear_0784 formylmethanofuran dehydrogenase subunit E region; PFAM: Formylmethanofuran dehydrogenase, subunit E domain; SPTR: Formylmethanofuran dehydrogenase subunit E region; IMG reference gene:2504154486; PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.773 |
AEB08825.1 | AEB08823.1 | Desac_0955 | Desac_0953 | Hypothetical protein; IMG reference gene:2504154488. | COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: aar:Acear_0784 formylmethanofuran dehydrogenase subunit E region; PFAM: Formylmethanofuran dehydrogenase, subunit E domain; SPTR: Formylmethanofuran dehydrogenase subunit E region; IMG reference gene:2504154486; PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon. | 0.416 |
AEB08825.1 | tatC | Desac_0955 | Desac_0954 | Hypothetical protein; IMG reference gene:2504154488. | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.416 |
tatC | AEB08823.1 | Desac_0954 | Desac_0953 | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: aar:Acear_0784 formylmethanofuran dehydrogenase subunit E region; PFAM: Formylmethanofuran dehydrogenase, subunit E domain; SPTR: Formylmethanofuran dehydrogenase subunit E region; IMG reference gene:2504154486; PFAM: Prokaryotic dksA/traR C4-type zinc finger; FmdE, Molybdenum formylmethanofuran dehydrogenase operon. | 0.773 |
tatC | AEB08825.1 | Desac_0954 | Desac_0955 | Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Hypothetical protein; IMG reference gene:2504154488. | 0.416 |