STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08898.1COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863:IPR019576; KEGG: nde:NIDE3729 putative M16 family Zn-dependent peptidase; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; PRIAM: processing peptidase; SPTR: Putative Zn-dependent protease, involved in pqq synthesis (PpqF); IMG reference gene:2504154565; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16). (459 aa)    
Predicted Functional Partners:
AEB08919.1
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR019575:IPR002023:IPR011538:IPR019554; KEGG: sat:SYN_02139 NADH-quinone oxidoreductase chain F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: NADH-quinone oxidoreductase chain F; IMG reference gene:2504154588; P [...]
   
 
 0.967
AEB08930.1
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR019575:IPR002023:IPR011538:IPR019554; KEGG: sat:SYN_02139 NADH-quinone oxidoreductase chain F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: NADH-quinone oxidoreductase chain F; IMG reference gene:2504154599; P [...]
   
 
 0.967
AEB08934.1
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR019575:IPR002023:IPR011538:IPR019554; KEGG: sat:SYN_02139 NADH-quinone oxidoreductase chain F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: NADH-quinone oxidoreductase chain F; IMG reference gene:2504154603; P [...]
   
 
 0.967
AEB08936.1
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR019575:IPR002023:IPR011538:IPR019554; KEGG: sat:SYN_02139 NADH-quinone oxidoreductase chain F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: NADH-quinone oxidoreductase chain F; manually curated; IMG reference [...]
   
 
 0.967
AEB09945.1
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR002023:IPR011538:IPR019554:IPR019575; KEGG: sat:SYN_02139 NADH-quinone oxidoreductase chain F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: NADH-quinone oxidoreductase chain F; IMG reference gene:2504155670; P [...]
   
 
 0.967
AEB08899.1
COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: nde:NIDE3730 putative M16 family Zn-dependent peptidase; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; PRIAM: processing peptidase; SPTR: Putative Peptidase M16 domain protein, involved in ppq synthesis (PpqG); IMG reference gene:2504154566; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
 
  
0.895
AEB08064.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR001450; KEGG: mpl:Mpal_0845 ferredoxin; PFAM: 4Fe-4S binding domain; Ferredoxin; SPTR: Ferredoxin; IMG reference gene:2504153687; PFAM: 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S binding domain.
   
 
 0.795
AEB09207.1
Ferredoxin; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR001450; KEGG: sat:SYN_00151 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: Ferredoxin; 4Fe-4S binding domain; SPTR: 2Fe-2S iron-sulfur cluster domain with dehydrogenase; IMG reference gene:2504154889; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
   
 
 0.795
AEB08900.1
Protease Do; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254:IPR011782; KEGG: gme:Gmet_1014 peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF; SPTR: Peptidase S1C, Do; TIGRFAM: Peptidase S1C, Do; IMG reference gene:2504154567; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; Belongs to the peptidase S1C family.
  
  
 0.789
AEB08558.1
NAD-dependent epimerase/dehydratase; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sfu:Sfum_3376 NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NmrA family protein; IMG reference gene:2504154205; PFAM: Protein of unknown function (DUF2867); NmrA-like family.
   
 
 0.785
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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