STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08904.1KEGG: dbr:Deba_2152 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504154571; PFAM: Methylene-tetrahydrofolate reductase C terminal. (228 aa)    
Predicted Functional Partners:
AEB07933.1
COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: sfu:Sfum_3130 methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; SPTR: Methylenetetrahydrofolate reductase; IMG reference gene:2504153552; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.783
AEB08709.1
COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: sfu:Sfum_3130 methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; SPTR: Methylenetetrahydrofolate reductase; IMG reference gene:2504154362; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.783
AEB08205.1
COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: dol:Dole_1151 methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; SPTR: Putative uncharacterized protein; IMG reference gene:2504153834; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.782
AEB08903.1
COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: pfu:PF0205 glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; SPTR: 4Fe-4S binding domain protein; IMG reference gene:2504154570; PFAM: Conserved region in glutamate synthase.
     
 0.773
AEB08905.1
COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; InterPro IPR003813; KEGG: dbr:Deba_2151 methyl-viologen-reducing hydrogenase delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; SPTR: Methyl-viologen-reducing hydrogenase, delta subunit; IMG reference gene:2504154572; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
       0.765
AEB08698.1
COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: dal:Dalk_2561 methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; SPTR: Methylenetetrahydrofolate reductase; IMG reference gene:2504154350; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.753
AEB08715.1
COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: dal:Dalk_3267 methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; SPTR: Putative uncharacterized protein; IMG reference gene:2504154368; PFAM: Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.751
AEB08901.1
COGs: COG0070 Glutamate synthase domain 3; InterPro IPR002489; KEGG: geo:Geob_3276 glutamine amidotransferase class-II; PFAM: Glutamate synthase, alpha subunit, C-terminal; SPTR: Putative uncharacterized protein; IMG reference gene:2504154568; PFAM: GXGXG motif; Glutamine amidotransferases class-II.
     
 0.592
AEB09800.1
COGs: COG1614 CO dehydrogenase/acetyl-CoA synthase beta subunit; InterPro IPR004461; KEGG: sfu:Sfum_2565 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; PRIAM: CO-methylating acetyl-CoA synthase; SPTR: Acetyl-CoA decarbonylase/synthase alpha subunit / acetyl-CoA decarbonylase/synthase beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; IMG reference gene:2504155518; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methyla [...]
 
   
 0.579
AEB08902.1
COGs: COG0069 Glutamate synthase domain 2; InterPro IPR001450:IPR002932; KEGG: pfu:PF0205 glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; 4Fe-4S binding domain; PRIAM: Glutamate synthase (NADPH); SPTR: Putative uncharacterized protein; IMG reference gene:2504154569; PFAM: Conserved region in glutamate synthase; Belongs to the glutamate synthase family.
     
 0.531
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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