STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB09343.1Hypothetical protein; KEGG: cre:CHLREDRAFT_194576 metalloproteinase of VMP family; SPTR: Metalloproteinase of VMP family; IMG reference gene:2504155032. (105 aa)    
Predicted Functional Partners:
AEB09342.1
COGs: COG4397 Mu-like prophage major head subunit gpT; InterPro IPR018774; KEGG: sat:SYN_02298 Mu-like prophage major head subunit; PFAM: Mu-like major head subunit gpT, prophage; SPTR: Mu-like prophage major head subunit; IMG reference gene:2504155031; PFAM: Mu-like prophage major head subunit gpT.
       0.563
AEB09339.1
Protein of unknown function DUF935; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: sfu:Sfum_1877 hypothetical protein; PFAM: Protein of unknown function DUF935; SPTR: Putative uncharacterized protein; IMG reference gene:2504155028; PFAM: Protein of unknown function (DUF935).
       0.523
AEB09340.1
COGs: COG4388 Mu-like prophage I protein; InterPro IPR019295; KEGG: sat:SYN_02300 Mu-like prophage FluMu I protein; PFAM: Mu-like prophage I protein; SPTR: Mu-like prophage Flumu I protein; IMG reference gene:2504155029; PFAM: Mu-like prophage I protein.
       0.523
AEB09341.1
KEGG: sat:SYN_03379 putative cytoplasmic protein; SPTR: Hypothetical cytosolic protein; IMG reference gene:2504155030.
       0.523
AEB09344.1
KEGG: sti:Sthe_2754 hypothetical protein; SPTR: Secreted protein; IMG reference gene:2504155033.
       0.522
AEB09345.1
Protein of unknown function DUF1320; COGs: COG4387 Mu-like prophage protein gp36; InterPro IPR009752; KEGG: sat:SYN_02296 Mu-like prophage FluMu protein GP36; PFAM: Protein of unknown function DUF1320; SPTR: Mu-like prophage Flumu protein gp36; IMG reference gene:2504155034; PFAM: Protein of unknown function (DUF1320).
       0.458
AEB09346.1
KEGG: sfu:Sfum_1885 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504155035; PFAM: Domain of unknown function (DUF1834).
       0.458
AEB09347.1
KEGG: dbr:Deba_2733 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504155036.
       0.458
AEB09338.1
ChaB family protein; InterPro IPR009317; KEGG: cyn:Cyan7425_0020 ChaB family protein; PFAM: ChaB; SPTR: Putative uncharacterized protein; IMG reference gene:2504155027; PFAM: ChaB.
       0.457
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.