STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB09432.1COGs: COG5345 conserved hypothetical protein; InterPro IPR016936; KEGG: dol:Dole_0654 hypothetical protein; PFAM: Uncharacterised conserved protein UCP029693; SPTR: Putative uncharacterized protein; IMG reference gene:2504155123; PFAM: Uncharacterized protein conserved in bacteria (DUF2333). (398 aa)    
Predicted Functional Partners:
AEB10461.1
KEGG: dol:Dole_1575 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156207; PFAM: Dynamin family.
  
     0.739
AEB09431.1
COGs: COG2078 conserved hypothetical protein; HAMAP: AMMECR1-domain protein; InterPro IPR002733; KEGG: sfu:Sfum_1996 AMMECR1 domain-containing protein; PFAM: AMMECR1; SPTR: AMMECR1 domain protein; TIGRFAM: AMMECR1; IMG reference gene:2504155122; PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family.
       0.592
AEB10188.1
Protein of unknown function UPF0153; InterPro IPR005358; KEGG: sfu:Sfum_2545 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: Putative uncharacterized protein; IMG reference gene:2504155924; PFAM: Uncharacterised protein family (UPF0153).
  
     0.513
AEB09384.1
Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: dde:Dde_0960 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative transcriptional regulator, TetR family; IMG reference gene:2504155073; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.468
AEB08891.1
COGs: COG2937 Glycerol-3-phosphate O-acyltransferase; InterPro IPR002123; KEGG: sfu:Sfum_3097 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; PRIAM: Glycerol-3-phosphate O-acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Glycerol-3-phosphate acyltransferase; IMG reference gene:2504154558; PFAM: Acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
  
     0.463
AEB08681.1
Fimbrial assembly family protein; InterPro IPR007813; KEGG: dat:HRM2_30140 GspL; PFAM: Fimbrial assembly; SPTR: GspL; IMG reference gene:2504154332; PFAM: Fimbrial assembly protein (PilN).
  
     0.450
AEB10210.1
Response regulator receiver; InterPro IPR001789; KEGG: sfu:Sfum_0647 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver protein; IMG reference gene:2504155948; PFAM: Response regulator receiver domain.
  
     0.440
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.