STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB09594.1COGs: COG2875 Precorrin-4 methylase; InterPro IPR000878; KEGG: dae:Dtox_0475 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Methyltransferase; IMG reference gene:2504155303; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases. (295 aa)    
Predicted Functional Partners:
AEB09865.1
COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: dal:Dalk_3436 siroheme synthase; SPTR: Siroheme synthase; TIGRFAM: Sirohaem synthase, N-terminal; IMG reference gene:2504155589; TIGRFAM: siroheme synthase, N-terminal domain.
 
  
 0.978
AEB10067.1
COGs: COG2243 Precorrin-2 methylase; InterPro IPR000878:IPR006364; KEGG: sfu:Sfum_2135 precorrin-2 C20-methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Precorrin-2 C20-methyltransferase / cobalt-factor II C20-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; IMG reference gene:2504155796; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase.
 
 
 0.968
AEB09706.1
uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878:IPR003754; KEGG: dol:Dole_3062 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; PRIAM: Uroporphyrinogen-III C-methyltransferase., Uroporphyrinogen-III synthase; SPTR: Uroporphyrinogen-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; IMG reference gene:2504155417; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporph [...]
 
 
0.949
AEB10065.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; COGs: COG2242 Precorrin-6B methylase 2; InterPro IPR000878:IPR012818:IPR014008; KEGG: dbr:Deba_2460 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Tetrapyrrole methylase; PRIAM: Precorrin-6Y C(5,15)-methyltransferase (decarboxylating); SPTR: Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; IMG referen [...]
  
  
 0.922
AEB10063.1
COGs: COG2073 Cobalamin biosynthesis protein CbiG; InterPro IPR002750; KEGG: dbr:Deba_2462 cobalamin (vitamin B12) biosynthesis CbiG protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; SPTR: Protein CbiG; IMG reference gene:2504155792; PFAM: Cobalamin biosynthesis central region; Cobalamin synthesis G C-terminus; Cobalamin synthesis G N-terminal.
 
  
 0.685
AEB10068.1
Precorrin-8X methylmutase; COGs: COG2082 Precorrin isomerase; InterPro IPR003722; KEGG: dal:Dalk_0445 precorrin-8X methylmutase CbiC/CobH; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core; PRIAM: Precorrin-8X methylmutase; SPTR: Precorrin-8X methylmutase CbiC/CobH; IMG reference gene:2504155797; PFAM: Precorrin-8X methylmutase.
 
  
 0.677
AEB10062.1
COGs: COG1010 Precorrin-3B methylase; InterPro IPR000878:IPR006363; KEGG: dal:Dalk_0452 precorrin-3B C17-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Precorrin-3B C(17)-methyltransferase; SPTR: Precorrin-3B C(17)-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; IMG reference gene:2504155791; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase.
 
  
 0.672
AEB09593.1
COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: mhu:Mhun_0224 FMN-binding protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; SPTR: Fmn-binding protein; IMG reference gene:2504155302; PFAM: Flavin reductase like domain.
       0.648
AEB08784.1
COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR005117:IPR006067; KEGG: sfu:Sfum_3159 nitrite and sulphite reductase 4Fe-4S region; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; PRIAM: Nitrite reductase (NAD(P)H); SPTR: Nitrite and sulphite reductase 4Fe-4S region; IMG reference gene:2504154446; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
 
     0.633
AEB09596.1
COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: ppd:Ppro_1252 amino acid permease-associated region; PFAM: Amino acid permease domain; SPTR: Amino acid permease-associated region; IMG reference gene:2504155305; PFAM: Amino acid permease.
 
     0.622
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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