STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB09620.1Gas vesicle protein GVPa; InterPro IPR000638; KEGG: mxa:MXAN_2767 GvpA family gas vesicle protein; PFAM: Gas vesicle protein GvpA; SPTR: Gas vesicle protein, GvpA family; IMG reference gene:2504155329; PFAM: Gas vesicle protein. (154 aa)    
Predicted Functional Partners:
AEB09619.1
Gas vesicle K; InterPro IPR007805; KEGG: pin:Ping_1261 gas vesicle protein K; PFAM: Gas vesicle protein GvpK; SPTR: Gas vesicle protein K; IMG reference gene:2504155328; PFAM: Gas vesicle protein K.
 
   
 0.950
AEB09618.1
Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.945
AEB09621.1
Arsenite-activated ATPase ArsA; Anion-transporting ATPase; Belongs to the arsA ATPase family.
 
     0.913
AEB09623.1
InterPro IPR009430; KEGG: pin:Ping_1258 gas vesicle synthesis GvpLGvpF; PFAM: Gas vesicle protein GvpL/GvpF; SPTR: Putative uncharacterized protein; IMG reference gene:2504155332; PFAM: Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.877
AEB09636.1
InterPro IPR009430; KEGG: pin:Ping_1248 gas vesicle synthesis GvpLGvpF; PFAM: Gas vesicle protein GvpL/GvpF; SPTR: Gas vesicle synthesis GvpLGvpF; IMG reference gene:2504155345; PFAM: Gas vesicle synthesis protein GvpL/GvpF.
 
     0.818
AEB09627.1
Gas vesicle protein GvpN; COGs: COG0714 MoxR-like ATPase; InterPro IPR011704:IPR003593:IPR013462; KEGG: pin:Ping_1750 gas vesicle protein GvpN; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; SPTR: Gas vesicle protein gvpN; TIGRFAM: Gas vesicle protein GvpN; IMG reference gene:2504155336; PFAM: AAA domain (dynein-related subfamily); TIGRFAM: gas vesicle protein GvpN.
 
     0.813
gvpA
Gas vesicle structural protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.809
AEB09632.1
HAMAP: Gas vesicle structural protein; InterPro IPR000638; KEGG: pin:Ping_1748 gas vesicle synthesis protein GvpA; PFAM: Gas vesicle protein GvpA; SPTR: Gas vesicle structural protein; IMG reference gene:2504155341; PFAM: Gas vesicle protein.
 
   
 0.807
AEB09635.1
Gas vesicle synthesis GvpLGvpF; InterPro IPR009430; KEGG: mxa:MXAN_2771 GvpL/GvpF family gas vesicle protein; PFAM: Gas vesicle protein GvpL/GvpF; SPTR: Gas vesicle protein, GvpL/GvpF family; IMG reference gene:2504155344; PFAM: Gas vesicle synthesis protein GvpL/GvpF.
 
     0.805
AEB09638.1
Heat shock protein Hsp20; InterPro IPR002068; KEGG: pin:Ping_1246 heat shock protein, HSP20 family protein; PFAM: Heat shock protein Hsp20; SPTR: Heat shock protein, HSP20 family protein; IMG reference gene:2504155347; PFAM: GvpH; Belongs to the small heat shock protein (HSP20) family.
 
     0.768
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.