STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB09777.1Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR001440:IPR019734; KEGG: nhl:Nhal_1414 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein; IMG reference gene:2504155494; PFAM: Tetratricopeptide repeat. (432 aa)    
Predicted Functional Partners:
AEB09776.1
InterPro IPR013105:IPR001440:IPR019734; KEGG: drt:Dret_1158 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein; IMG reference gene:2504155493; PFAM: Tetratricopeptide repeat.
 
     0.916
AEB10745.1
Tetratricopeptide TPR_2 repeat-containing protein; COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR001440:IPR013105:IPR019734; KEGG: mno:Mnod_2480 peptidase C14 caspase catalytic subunit P20; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Peptidase C14 caspase catalytic subunit p20; IMG reference gene:2504156518; PFAM: Tetratricopeptide repeat.
 
 
 0.770
AEB09775.1
KEGG: dal:Dalk_2416 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504155492.
       0.689
AEB09779.1
Type II and III secretion system protein; COGs: COG4964 Flp pilus assembly protein secretin CpaC; InterPro IPR007055:IPR004846; KEGG: sfu:Sfum_1493 type II and III secretion system protein; PFAM: Type II/III secretion system; Transport-associated; SPTR: Type II and III secretion system protein; IMG reference gene:2504155496; PFAM: Putative phospholipid-binding domain; Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.689
AEB09612.1
Tetratricopeptide TPR_2 repeat-containing protein; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001440:IPR013105:IPR019734; KEGG: mba:Mbar_A2893 O-linked N-acetylglucosamine transferase; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: O-linked N-acetylglucosamine transferase; IMG reference gene:2504155321; PFAM: Tetratricopeptide repeat.
 
   
 0.661
AEB10158.1
Tetratricopeptide TPR_2 repeat-containing protein; COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734:IPR013105; KEGG: nde:NIDE1962 hypothetical protein; PFAM: Tetratricopeptide TPR2; SPTR: Putative uncharacterized protein; IMG reference gene:2504155894; PFAM: Tetratricopeptide repeat.
  
     0.652
AEB09367.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013105:IPR001440; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein; IMG reference gene:2504155056; PFAM: Tetratricopeptide repeat.
 
     0.644
AEB10124.1
InterPro IPR019734:IPR001440; KEGG: cyc:PCC7424_1361 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat family; IMG reference gene:2504155858; PFAM: Tetratricopeptide repeat.
  
     0.641
AEB10743.1
VWFA-related domain-containing protein; InterPro IPR002035:IPR000253:IPR017802; KEGG: ttr:Tter_1017 von Willebrand factor type A; type II secretion system protein; PFAM: von Willebrand factor, type A; Forkhead-associated (FHA) domain; SMART: von Willebrand factor, type A; SPTR: von Willebrand factor type A; type II secretion system protein; TIGRFAM: VWFA-related, acidobacterial-type; IMG reference gene:2504156516; PFAM: von Willebrand factor type A domain; FHA domain; TIGRFAM: VWFA-related Acidobacterial domain.
 
  
 0.586
AEB09886.1
Tetratricopeptide TPR_2 repeat-containing protein; COGs: COG2956 N-acetylglucosaminyl transferase; InterPro IPR001440:IPR013105:IPR011717:IPR019734; KEGG: dbr:Deba_3097 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; SPTR: Putative uncharacterized protein; IMG reference gene:2504155610; PFAM: ChAPs (Chs5p-Arf1p-binding proteins); Tetratricopeptide repeat.
 
 
 
 0.551
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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