STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB09912.1Type II secretion system F domain protein; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: pol:Bpro_2556 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; IMG reference gene:2504155636; PFAM: Bacterial type II secretion system protein F domain. (339 aa)    
Predicted Functional Partners:
AEB09914.1
COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: dma:DMR_33830 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504155638; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
  
 0.964
AEB08663.1
Type II secretion system F domain protein; COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: cti:RALTA_A0688 Tad secretion system, secretion accessory protein; PFAM: Type II secretion system F domain; SPTR: Tad secretion system, secretion accessory protein; IMG reference gene:2504154314; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.947
AEB09911.1
Type II secretion system F domain protein; COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: sat:SYN_01499 flp pilus assembly protein; PFAM: Type II secretion system F domain; SPTR: Flp pilus assembly protein; IMG reference gene:2504155635; PFAM: Bacterial type II secretion system protein F domain.
 
  
0.947
AEB08666.1
Response regulator receiver protein; COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: ank:AnaeK_2914 Flp pilus assembly protein ATPase CpaE-like protein; SPTR: Flp pilus assembly protein ATPase CpaE-like protein; IMG reference gene:2504154317; PFAM: Response regulator receiver domain; CobQ/CobB/MinD/ParA nucleotide binding domain.
 
  
 0.942
AEB09913.1
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482; KEGG: sfu:Sfum_1498 type II secretion system protein E; PFAM: Type II secretion system protein E; SPTR: Type II secretion system protein E; IMG reference gene:2504155637; PFAM: Type II/IV secretion system protein.
 
  
 0.942
AEB09915.1
COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR017592:IPR013974; KEGG: nmu:Nmul_A2361 Flp pilus assembly CpaB; PFAM: SAF domain; SMART: SAF domain; SPTR: Flp pilus assembly CpaB; TIGRFAM: Pilus assembly, Flp-type CpaB; IMG reference gene:2504155639; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.912
AEB08665.1
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482; KEGG: mmb:Mmol_1394 type II secretion system protein E; PFAM: Type II secretion system protein E; SPTR: Type II secretion system protein E; IMG reference gene:2504154316; PFAM: Type II/IV secretion system protein.
 
  
 0.905
AEB08670.1
Peptidase A24A prepilin type IV; COGs: COG4960 Flp pilus assembly protein protease CpaA; InterPro IPR000045; KEGG: cti:RALTA_A0699 prepilin peptidase transmembrane protein; PFAM: Peptidase A24A, prepilin type IV; SPTR: PREPILIN PEPTIDASE TRANSMEMBRANE PROTEIN; IMG reference gene:2504154321; PFAM: Type IV leader peptidase family.
 
  
 0.892
AEB09771.1
TadE family protein; InterPro IPR012495; KEGG: bph:Bphy_5858 TadE family protein; PFAM: TadE-like; SPTR: TadE family protein; IMG reference gene:2504155488; PFAM: TadE-like protein.
 
  
 0.874
AEB08668.1
COGs: COG3745 Flp pilus assembly protein CpaB; KEGG: dbr:Deba_1990 Flp pilus assembly protein CpaB; SPTR: Flp pilus assembly protein CpaB; IMG reference gene:2504154319; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.855
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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