STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB09949.1KEGG: cpc:Cpar_1163 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504155674. (62 aa)    
Predicted Functional Partners:
AEB09948.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR001450; KEGG: geo:Geob_2072 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; IMG reference gene:2504155673.
       0.529
AEB09947.1
Uncharacterized protein family UPF0066; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: alv:Alvin_3236 protein of unknown function UPF0066; PFAM: Uncharacterised protein family UPF0066; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0066; IMG reference gene:2504155672; PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family.
       0.430
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.