STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Coexpression
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[Homology]
Score
palPeptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (191 aa)    
Predicted Functional Partners:
AEB09960.1
Protein tolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.966
AEB09183.1
InterPro IPR005632; KEGG: glo:Glov_0761 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); IMG reference gene:2504154865; PFAM: Outer membrane protein (OmpH-like).
 
 
 0.838
AEB10044.1
COGs: COG1729 conserved hypothetical protein; KEGG: gsu:GSU0023 TPR domain protein; SPTR: TPR domain protein; IMG reference gene:2504155770; TIGRFAM: tol-pal system protein YbgF.
 
  
 0.830
AEB09394.1
Lytic transglycosylase catalytic; InterPro IPR002482:IPR008258:IPR018392; KEGG: gsu:GSU1010 Slt family transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Transglycosylase, Slt family; IMG reference gene:2504155083; PFAM: Transglycosylase SLT domain; LysM domain.
 
 
 0.825
AEB10532.1
Outer membrane chaperone Skp (OmpH); COGs: COG2825 Outer membrane protein; InterPro IPR005632; KEGG: bba:Bd1494 hypothetical protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Putative exported protein; IMG reference gene:2504156280; PFAM: Outer membrane protein (OmpH-like).
 
 
 0.791
AEB09963.1
Protein TolQ; COGs: COG0811 Biopolymer transport protein; InterPro IPR014163:IPR002898; KEGG: dol:Dole_2213 Tol-Pal system TolQ; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Protein tolQ; TIGRFAM: Tol-Pal system, TolQ; IMG reference gene:2504155688; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein.
 
   
 0.783
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.752
AEB10554.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254:IPR001440:IPR013105:IPR019734; KEGG: cpc:Cpar_1378 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Peptidase S1/S6, chymotrypsin/Hap; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat:Tetratricopeptide TPR_4; IMG reference gene:2504156303; PFAM: Trypsin; Tetratricopeptide repeat.
   
 
 0.735
AEB10235.1
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
 
 0.731
AEB07923.1
COGs: COG0539 Ribosomal protein S1; InterPro IPR018032:IPR022967:IPR003029; KEGG: sfu:Sfum_2118 ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; SPTR: SSU ribosomal protein S1P; TIGRFAM: Ribosomal S1 synthesis/modification protein; IMG reference gene:2504153542; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1.
 
  
 0.708
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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