STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10255.1KEGG: dba:Dbac_0440 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504155993. (246 aa)    
Predicted Functional Partners:
AEB10254.1
DNA methylase N-4/N-6 domain protein; COGs: COG2189 Adenine specific DNA methylase Mod; InterPro IPR002941; KEGG: tel:tll1482 adenine specific DNA methylase; PFAM: DNA methylase N-4/N-6; SPTR: Site-specific DNA-methyltransferase (Adenine-specific); IMG reference gene:2504155992; PFAM: DNA methylase.
       0.453
AEB09570.1
KEGG: npu:Npun_F3820 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504155278; PFAM: Transposase IS200 like.
  
     0.450
AEB10256.1
Type III restriction protein res subunit; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935; KEGG: tel:tll1480 type III restriction-modification enzyme helicase subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; SPTR: Type III restriction-modification enzyme helicase subunit; IMG reference gene:2504155994; PFAM: Type III restriction enzyme, res subunit.
       0.418
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.