STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10329.1COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: sfu:Sfum_0493 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein; IMG reference gene:2504156068; PFAM: Periplasmic binding protein. (328 aa)    
Predicted Functional Partners:
AEB10328.1
ABC-type transporter, integral membrane subunit; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ppd:Ppro_2080 transport system permease protein; PFAM: ABC transporter permease protein; SPTR: Transport system permease protein; IMG reference gene:2504156067; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.993
AEB10327.1
Iron-chelate-transporting ATPase; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: ppd:Ppro_2081 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2504156066; PFAM: ABC transporter.
 
 
 0.991
AEB08471.1
ABC-type transporter, integral membrane subunit; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: sfu:Sfum_2740 transport system permease protein; PFAM: ABC transporter permease protein; SPTR: Transport system permease protein; IMG reference gene:2504154112; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.970
AEB08470.1
Iron-chelate-transporting ATPase; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: sfu:Sfum_2739 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2504154111; PFAM: ABC transporter.
 
 
 0.961
AEB10330.1
COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: sfu:Sfum_0492 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504156069; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
  
 0.881
AEB10325.1
COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR000523:IPR002035:IPR012804:IPR003593; KEGG: ppd:Ppro_1261 magnesium chelatase; PFAM: von Willebrand factor, type A; Magnesium chelatase, ChlI subunit; PRIAM: Magnesium chelatase; SMART: von Willebrand factor, type A; ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: Cobaltochelatase subunit; IMG reference gene:2504156064; PFAM: Magnesium chelatase, subunit ChlI; von Willebrand factor type A domain; TIGRFAM: cobaltochelatase subunit.
       0.728
AEB10326.1
Cobaltochelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: adg:Adeg_1646 cobaltochelatase; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: Cobaltochelatase; IMG reference gene:2504156065; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
  
    0.712
AEB10324.1
COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR000523:IPR003593; KEGG: cts:Ctha_2442 magnesium chelatase; PFAM: Magnesium chelatase, ChlI subunit; PRIAM: Magnesium chelatase; SMART: ATPase, AAA+ type, core; SPTR: Magnesium-chelatase subunit chlI homolog; IMG reference gene:2504156063; PFAM: Magnesium chelatase, subunit ChlI.
       0.710
AEB09855.1
KEGG: sfu:Sfum_1116 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding; manually curated; IMG reference gene:2504155576; PFAM: Pyridoxamine 5'-phosphate oxidase.
  
    0.585
AEB10280.1
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR001242:IPR000873:IPR006163:IPR001031:IPR 010071; KEGG: mar:MAE_60000 McnE protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Thioesterase; SPTR: OciC; TIGRFAM: Amino acid adenylation; IMG reference gene:2504156018; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.508
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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