STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10333.1Uncharacterized protein family UPF0150; InterPro IPR005357; KEGG: mpi:Mpet_1167 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein; IMG reference gene:2504156074. (82 aa)    
Predicted Functional Partners:
AEB10332.1
KEGG: sfu:Sfum_4098 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156073.
       0.746
AEB10334.1
Peptidase U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: dak:DaAHT2_0504 peptidase U32; PFAM: Peptidase U32; SPTR: Peptidase U32; IMG reference gene:2504156075; PFAM: Peptidase family U32.
       0.689
AEB10331.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.655
AEB08908.1
KEGG: mar:MAE_00130 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504154575.
   
 
 0.523
AEB09499.1
YcfA family protein; InterPro IPR012933; KEGG: dak:DaAHT2_2044 YcfA family protein; PFAM: Uncharacterised protein family UPF0395; SPTR: YcfA family protein; manually curated; IMG reference gene:2504155197; PFAM: YcfA-like protein.
   
 
 0.523
AEB10081.1
YcfA family protein; InterPro IPR012933; KEGG: fpl:Ferp_2052 YcfA family protein; PFAM: Uncharacterised protein family UPF0395; SPTR: YcfA family protein; IMG reference gene:2504155812; PFAM: YcfA-like protein.
   
 
 0.523
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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