STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10436.1Hypothetical protein; KEGG: fjo:Fjoh_2813 O-antigen polymerase; SPTR: Tetratricopeptide repeat family; IMG reference gene:2504156180. (162 aa)    
Predicted Functional Partners:
AEB10437.1
Hypothetical protein; KEGG: adg:Adeg_0058 transcription termination factor Rho; SPTR: Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_6; IMG reference gene:2504156181.
       0.458
AEB10434.1
MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518:IPR011551; KEGG: gem:GM21_0909 nucleoside triphosphate pyrophosphohydrolase; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; IMG reference gene:2504156178; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein.
       0.400
AEB10435.1
COGs: COG1286 membrane protein required for colicin V production; InterPro IPR003825; KEGG: dat:HRM2_35760 putative colicin V production protein-like protein; PFAM: Colicin V production, CvpA; SPTR: Putative colicin V production protein-like protein; IMG reference gene:2504156179; PFAM: Colicin V production protein.
       0.400
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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