STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10544.1COGs: COG2181 Nitrate reductase gamma subunit; InterPro IPR003816; KEGG: sfu:Sfum_1146 nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; SPTR: Nitrate reductase, gamma subunit; IMG reference gene:2504156292; PFAM: Nitrate reductase gamma subunit. (344 aa)    
Predicted Functional Partners:
AEB10540.1
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: sfu:Sfum_1150 polysulphide reductase, NrfD; PFAM: Polysulphide reductase, NrfD; SPTR: Putative uncharacterized protein; IMG reference gene:2504156288; PFAM: Polysulphide reductase, NrfD.
 
  
 0.962
AEB10543.1
COGs: COG0247 Fe-S oxidoreductase; KEGG: mta:Moth_1606 4Fe-4S ferredoxin, iron-sulfur binding; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding; IMG reference gene:2504156291.
 
 
 0.958
AEB10541.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR006311; KEGG: dsy:DSY0315 putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 precursor; PFAM: 4Fe-4S binding domain; SPTR: Putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1; IMG reference gene:2504156289; PFAM: 4Fe-4S binding domain.
 
  
 0.956
AEB10542.1
Hypothetical protein; KEGG: mta:Moth_1605 cytochrome c family protein; SPTR: Cytochrome c family protein; IMG reference gene:2504156290.
 
  
 0.955
AEB10545.1
KEGG: sfu:Sfum_1145 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156293.
 
   
 0.929
AEB09530.1
COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: sdl:Sdel_0649 2-nitropropane dioxygenase NPD; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: 2-nitropropane dioxygenase NPD; IMG reference gene:2504155230; PFAM: 2-nitropropane dioxygenase.
    
  0.902
AEB09472.1
COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterPro IPR006067:IPR011806; KEGG: dbr:Deba_0960 dissimilatory sulfite reductase alpha subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; PRIAM: Hydrogensulfite reductase; SPTR: Dissimilatory sulfite reductase alpha subunit; TIGRFAM: Sulphite reductase, dissimilatory-type alpha subunit; IMG reference gene:2504155168; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit.
 
   
 0.830
AEB09471.1
COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterPro IPR005117:IPR006067:IPR001450:IPR011808; KEGG: sfu:Sfum_4043 sulfite reductase, dissimilatory-type beta subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; 4Fe-4S binding domain; PRIAM: Hydrogensulfite reductase; SPTR: Sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: Sulphite reductase, dissimilatory-type beta subunit; IMG reference gene:2504155167; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; N [...]
 
   
 0.829
AEB08519.1
Sulfur relay protein, TusE/DsrC/DsvC family; COGs: COG2920 Dissimilatory sulfite reductase (desulfoviridin) gamma subunit; InterPro IPR007453; KEGG: dma:DMR_15890 sulfite reductase gamma subunit; PFAM: DsrC-like protein; PRIAM: Hydrogensulfite reductase; SPTR: Sulfite reductase gamma subunit; TIGRFAM: DsrC-like protein; IMG reference gene:2504154165; PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family.
 
   
 0.826
AEB08695.1
Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; Contains selenocysteine; InterPro IPR004017; KEGG: dps:DP1009 Fe-S oxidoreductase; PFAM: Cysteine-rich domain; SPTR: Probable Fe-S oxidoreductase; manually curated; IMG reference gene:2504154347; PFAM: Cysteine-rich domain.
 
 
 0.734
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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