STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10598.1CRISPR-associated protein, APE2256 family; COGs: COG4006 conserved hypothetical protein; InterPro IPR013442; KEGG: ttm:Tthe_0939 CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein APE2256; SPTR: CRISPR-associated protein, APE2256 family; TIGRFAM: CRISPR-associated protein APE2256; IMG reference gene:2504156354; PFAM: CRISPR-associated protein (Cas_APE2256); TIGRFAM: putative CRISPR-associated protein, APE2256 family. (243 aa)    
Predicted Functional Partners:
AEB10597.1
KEGG: nfa:nfa29320 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156353.
       0.773
AEB10599.1
Protein of unknown function DUF324; InterPro IPR005537; KEGG: bts:Btus_2244 cold-shock DNA-binding domain protein; PFAM: Protein of unknown function DUF324; SPTR: Cold-shock DNA-binding domain protein; IMG reference gene:2504156355; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated protein.
       0.734
AEB10601.1
Protein of unknown function DUF324; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: dau:Daud_1800 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein; IMG reference gene:2504156357; PFAM: RAMP superfamily.
       0.734
AEB10596.1
KEGG: cag:Cagg_1065 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156352; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated protein.
       0.733
AEB10600.1
Hypothetical protein; KEGG: cel:W06H8.8 TiTiN family member (ttn-1); SPTR: 2MDa_1 protein; IMG reference gene:2504156356.
       0.727
AEB10604.1
KEGG: cya:CYA_0880 CRISPR-associated RAMP Csx10 family protein; SPTR: CRISPR-associated RAMP protein, Csx10 family; IMG reference gene:2504156360; TIGRFAM: CRISPR-associated RAMP protein, Csx10 family.
       0.721
AEB10606.1
Hypothetical protein; COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs); KEGG: lba:Lebu_1069 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156362.
       0.715
AEB10602.1
CRISPR-associated RAMP protein, SSO1426 family; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR013411; KEGG: dau:Daud_1801 CRISPR-associated Csm3 family protein; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, SSO1426 family; TIGRFAM: CRISPR-associated RAMP TM1809; IMG reference gene:2504156358; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family.
       0.709
AEB10605.1
Protein of unknown function DUF324; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: adg:Adeg_0981 protein of unknown function DUF324; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein; IMG reference gene:2504156361; PFAM: RAMP superfamily.
       0.704
AEB10603.1
Hypothetical protein; KEGG: mmx:MmarC6_1579 glycosyl transferase family protein; SPTR: Aspartate-semialdehyde dehydrogenase; IMG reference gene:2504156359.
       0.702
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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