STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB10628.1KEGG: sfu:Sfum_3603 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156391. (175 aa)    
Predicted Functional Partners:
AEB10386.1
KEGG: mxa:MXAN_2242 putative lipoprotein; SPTR: Von Willebrand factor type D domain protein; IMG reference gene:2504156129.
  
 
 0.844
AEB10541.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR006311; KEGG: dsy:DSY0315 putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 precursor; PFAM: 4Fe-4S binding domain; SPTR: Putative Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1; IMG reference gene:2504156289; PFAM: 4Fe-4S binding domain.
  
 
 0.842
AEB10540.1
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: sfu:Sfum_1150 polysulphide reductase, NrfD; PFAM: Polysulphide reductase, NrfD; SPTR: Putative uncharacterized protein; IMG reference gene:2504156288; PFAM: Polysulphide reductase, NrfD.
   
 
 0.833
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.788
AEB09326.1
COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160; KEGG: sfu:Sfum_1553 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; IMG reference gene:2504155011; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: sm [...]
  
 
 0.788
AEB08521.1
D-lactate dehydrogenase (cytochrome); COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: dol:Dole_0002 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase domain protein; IMG reference gene:2504154167; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.
  
 
 0.738
AEB08739.1
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR004489; KEGG: pth:PTH_1018 fumarate reductase iron-sulfur subunit; PRIAM: Succinate dehydrogenase; SPTR: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; IMG reference gene:2504154392; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
  
 0.638
AEB10629.1
KEGG: ppd:Ppro_1979 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156392.
       0.566
AEB08084.1
COGs: COG0348 Polyferredoxin; InterPro IPR006311:IPR001450; KEGG: sat:SYN_02058 4Fe-4S binding protein; PFAM: 4Fe-4S binding domain; SPTR: 4Fe-4S binding protein; IMG reference gene:2504153708; TIGRFAM: MauM/NapG family ferredoxin-type protein.
  
  
 0.537
AEB07994.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003018:IPR003661:IPR 003594:IPR001789:IPR008207:IPR013655:IPR013767; KEGG: ava:Ava_1029 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; PAS fold; GAF; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/ph [...]
  
  
 0.402
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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