STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF17751.1Multiple sugar transport system substrate-binding protein. (438 aa)    
Predicted Functional Partners:
APF17753.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 
 0.986
APF17752.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
 0.980
APF19162.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 
 0.943
APF18949.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 
 0.905
Cabys_31
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
 
 0.896
APF17756.1
Putative exported protein precursor.
 
     0.890
APF18810.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
 0.890
APF17754.1
Putative glycosyl hydrolase, GH43/DUF377 family.
 
     0.808
APF17755.1
Putative glycosyl hydrolase, GH43/DUF377 family.
 
     0.791
Cabys_32
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   
 0.758
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.