STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF17776.1Heparinase II/III-like protein. (624 aa)    
Predicted Functional Partners:
APF17777.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.940
APF17778.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
     0.823
APF20192.1
Putative dehydrogenase.
 
     0.802
APF17779.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
     0.758
APF20188.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.716
APF20193.1
Putative dehydrogenase.
 
     0.709
APF17774.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.512
APF17775.1
Transferase hexapeptide (six repeat-containing protein).
       0.512
APF17772.1
Na+-driven multidrug efflux pump.
       0.450
APF17773.1
O-antigen ligase.
       0.438
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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