STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acpPacpP acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (80 aa)    
Predicted Functional Partners:
nuoC/nuoD
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 0.972
APF20423.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
   
 0.947
APF18150.1
Amino acid adenylation domain-containing protein.
  
 
 0.935
acpP-2
acpP acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
  
 
0.908
APF20162.1
Acyl carrier protein.
     
  0.900
APF18136.1
Amino acid adenylation domain-containing protein.
  
 
 0.885
APF20204.1
(Acyl-carrier-protein) S-malonyltransferase.
  
 0.821
APF18095.1
Acetyltransferase.
       0.723
rplU
rplU large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
 
 0.713
nagB
nagB glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
   
 
 0.669
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.