Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APF18170.1 | APF18175.1 | Cabys_1421 | Cabys_1426 | DNA-binding regulatory protein, YebC/PmpR family. | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | 0.659 |
| APF18170.1 | APF18176.1 | Cabys_1421 | Cabys_1427 | DNA-binding regulatory protein, YebC/PmpR family. | Membrane protein DedA, SNARE-associated domain. | 0.691 |
| APF18170.1 | cysS | Cabys_1421 | Cabys_1430 | DNA-binding regulatory protein, YebC/PmpR family. | cysS cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.697 |
| APF18170.1 | gltX | Cabys_1421 | Cabys_1428 | DNA-binding regulatory protein, YebC/PmpR family. | gltX glutamyl-tRNA synthetase/nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.671 |
| APF18170.1 | queA | Cabys_1421 | Cabys_1425 | DNA-binding regulatory protein, YebC/PmpR family. | queA S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.724 |
| APF18170.1 | ruvA | Cabys_1421 | Cabys_1423 | DNA-binding regulatory protein, YebC/PmpR family. | ruvA Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.944 |
| APF18170.1 | ruvB | Cabys_1421 | Cabys_1424 | DNA-binding regulatory protein, YebC/PmpR family. | ruvB Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.854 |
| APF18170.1 | ruvC | Cabys_1421 | Cabys_1422 | DNA-binding regulatory protein, YebC/PmpR family. | ruvC Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.879 |
| APF18175.1 | APF18170.1 | Cabys_1426 | Cabys_1421 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | DNA-binding regulatory protein, YebC/PmpR family. | 0.659 |
| APF18175.1 | APF18176.1 | Cabys_1426 | Cabys_1427 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | Membrane protein DedA, SNARE-associated domain. | 0.804 |
| APF18175.1 | cysS | Cabys_1426 | Cabys_1430 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | cysS cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.745 |
| APF18175.1 | gltX | Cabys_1426 | Cabys_1428 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | gltX glutamyl-tRNA synthetase/nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.824 |
| APF18175.1 | queA | Cabys_1426 | Cabys_1425 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | queA S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.768 |
| APF18175.1 | ruvA | Cabys_1426 | Cabys_1423 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | ruvA Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.701 |
| APF18175.1 | ruvB | Cabys_1426 | Cabys_1424 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | ruvB Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.702 |
| APF18175.1 | ruvC | Cabys_1426 | Cabys_1422 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | ruvC Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.692 |
| APF18176.1 | APF18170.1 | Cabys_1427 | Cabys_1421 | Membrane protein DedA, SNARE-associated domain. | DNA-binding regulatory protein, YebC/PmpR family. | 0.691 |
| APF18176.1 | APF18175.1 | Cabys_1427 | Cabys_1426 | Membrane protein DedA, SNARE-associated domain. | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. | 0.804 |
| APF18176.1 | cysS | Cabys_1427 | Cabys_1430 | Membrane protein DedA, SNARE-associated domain. | cysS cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.745 |
| APF18176.1 | gltX | Cabys_1427 | Cabys_1428 | Membrane protein DedA, SNARE-associated domain. | gltX glutamyl-tRNA synthetase/nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.790 |
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