STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF18338.1Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (357 aa)    
Predicted Functional Partners:
APF19550.1
Galactokinase; Belongs to the GHMP kinase family.
 0.984
APF19454.1
Glycosyl hydrolases family 2, TIM barrel domain.
 
 
 0.932
APF18420.1
Alpha-galactosidase.
  
 
  0.906
APF18707.1
Glucokinase.
    
 0.906
APF19414.1
Glucokinase.
    
 0.906
APF19552.1
Glycosyl hydrolases family 2, sugar binding domain.
  
 
  0.906
APF19553.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 
0.906
APF20231.1
Glucokinase.
    
 0.906
APF20570.1
Putative hydrolase of the HAD superfamily.
   
 
  0.902
APF18336.1
Mannose-6-phosphate isomerase, type 1.
     
 0.788
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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