Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APF18412.1Acyl-CoA dehydrogenase. (383 aa)    
Predicted Functional Partners:
Cabys_292
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.989
Cabys_294
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.985
Cabys_881
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.933
Cabys_880
Electron transfer flavoprotein beta subunit.
 
 0.912
nuoC/nuoD
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 0.876
Cabys_293
Electron transfer flavoprotein beta subunit.
 
 0.871
APF20110.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.857
APF19153.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 0.841
APF19152.1
methylglutaconyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.828
APF19761.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.801
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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