STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF18453.12-oxoglutarate ferredoxin oxidoreductase subunit beta. (345 aa)    
Predicted Functional Partners:
APF18452.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 0.999
Cabys_262
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
APF19874.1
Ketoisovalerate ferredoxin oxidoreductase, alpha subunit.
 
 
 0.971
APF19062.1
Allosteric NADP-dependent malic enzyme.
   
 0.940
APF18526.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.929
Cabys_704
Malate dehydrogenase (NAD); Catalyzes the conversion of lactate to pyruvate.
  
 
 0.929
sucD
succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 
 0.926
Cabys_156
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.925
sucC
sucC succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.924
Cabys_22
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.918
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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