STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF18686.1Initiation factor 2 subunit family protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (296 aa)    
Predicted Functional Partners:
selB
Selenocysteine-specific translation elongation factor SelB.
   
 0.953
APF18392.1
Nucleotidyl transferase.
   
 0.936
Cabys_442
Nucleotidyl transferase.
   
 0.933
APF18685.1
Divalent cation tolerance protein.
       0.773
APF18687.1
Looped-hinge helix DNA binding domain-containing protein, AbrB family.
       0.773
APF18688.1
Putative nucleic acid-binding protein, contains PIN domain.
       0.773
APF18689.1
Hypothetical protein.
       0.773
yqeB
Selenium-dependent molybdenum hydroxylase system protein YqeB.
       0.773
APF18691.1
Alanine or glycine:cation symporter, AGCS family.
       0.678
APF19752.1
Translation initiation factor 1 (eIF-1/SUI1).
   
 
 0.415
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.