STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF18720.1Cellulase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (346 aa)    
Predicted Functional Partners:
APF18708.1
Non-processive endocellulase.
 
 
 0.973
APF18717.1
Beta-glucosidase.
  
 0.965
APF19198.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.954
APF19318.1
Cellobiose phosphorylase.
 
  
 0.954
APF18850.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
 0.942
APF18099.1
Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.936
APF17756.1
Putative exported protein precursor.
  
 
 0.815
APF18719.1
Hypothetical protein.
       0.773
APF19413.1
ER degradation enhancer, mannosidase alpha-like 2.
   
 
 0.772
Cabys_702
Hypothetical protein.
   
 
 0.772
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.